SCN1A Family-targeted Sequencing

CPT: 81403
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Synonyms

  • Dravet Syndrome, FEB3

Test Includes

This test only covers the exon or amplicon that harbors the variant of interest. Other regions of the gene will not be examined.


Expected Turnaround Time

24 - 28 days


Related Documents

For more information, please view the literature below.

SCN1A-related Seizure Disorders Genetic Testing Patient Flyer


    Specimen Requirements


    Specimen

    Whole blood


    Volume

    7 mL


    Minimum Volume

    3 mL


    Container

    Lavender-top (EDTA) tube or yellow-top (ACD) tube


    Storage Instructions

    Maintain at room temperature or refrigerate at 4°C.


    Causes for Rejection

    Frozen or hemolyzed specimen; quantity not sufficient for analysis; improper container


    Test Details


    Use

    This test is intended for testing of additional family members once a pathogenic variant or variant of uncertain significance has been identified in an affected individual. This option is available when the mutation is known and can be documented by the ordering physician. If the mutation cannot be documented, please order full gene sequencing.


    Limitations

    This method does not reliably detect mosaic variants; large deletions; large duplications, inversions, or other rearrangements; deep intronic variants or variants outside of the regions targeted by this analysis. It may be affected by allele-dropout, it may not allow determination of the exact numbers of T/A or microsatellite repeats, and it does not allow any conclusion as to whether two heterozygous variants are present on the same or on different chromosome copies.

    Results of this test are for investigational purposes only. The performance characteristics of this assay have been determined by LabCorp. The result should not be used as a diagnostic procedure without confirmation of the diagnosis by another medically established diagnostic product or procedure.


    Methodology

    DNA sequencing


    Additional Information

    SCN1A-related seizure disorders encompass a spectrum of autosomal dominant disorders that ranges from simple febrile seizures (FS) and generalized epilepsy with febrile seizures plus (GEFS+) at the mild end to Dravet syndrome and intractable childhood epilepsy with generalized tonic-clonic seizures (ICE-GTC) at the severe end. Less commonly observed phenotypes include myoclonic-astatic epilepsy (MAE or Doose syndrome), Lennox-Gastaut syndrome (LGS), infantile spasms, and vaccine-related encephalopathy and seizures. Individuals with seizures on the more severe end of the spectrum most often carry a de novo pathogenic variant while individuals on the milder end of the spectrum often have an inherited pathogenic variant. In addition, the clinical presentation of family members carrying the same pathogenic SCN1A variant can vary. Consequently, testing combined with a detailed clinical history is recommended for the parents of any child with a SCN1A pathogenic variant or variant of uncertain significance.


    References

    Claes L, Ceulemans B, Audenaert D, et al. De Novo SCN1A mutations are a major cause of severe myoclonic epilepsy of infancy, Hum Mutat. 2003 Jun; 21(6):615-621. 12754708
    Mulley JC, Scheffer IE, Petrou S, Dibbens LM, Berkovic SF, Harkin LA. SCN1A mutations and epilepsy. Hum Mutat. 2005 Jun; 25(6):535-542. 15880351
    National Institute of Neurological Disorder and Seizures. Seizures and Epilepsy: Hope Through Research. National Institutes of Health Publications N° 04-156, originally published May 2004; updated March 2, 2006. Available at: http://www.ninds.nih.gov/disorders/epilepsy/detail_epilepsy.htm

    LOINC® Map

    Order Code Order Code Name Order Loinc Result Code Result Code Name UofM Result LOINC
    511274 SCN1A Family Targeted 41765-9 511275 SCN1A Family Targeted 41765-9

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